BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018H07LP1|AL427396
(685 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1105 188 1e-47
3x_Contig1619 100 6e-21
>3x_Contig1105
Length = 3123
Score = 188 bits (91), Expect = 1e-47
Identities = 97/102 (95%)
Strand = Plus / Minus
Query: 354 catagaaaggaaggagtatataatcccgcggatyattatgatccgcgagaaaacgtgatt 413
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1689 catagaaaggaaggagtatataatcccgcggatcattatgatccgcgagaaaacgtgatt 1630
Query: 414 ttctaawtatactgataatattantatataawattwtatatt 455
|||||| |||||||||||||||| ||||||| ||| ||||||
Sbjct: 1629 ttctaattatactgataatattaatatataaaattatatatt 1588
Score = 128 bits (62), Expect = 1e-29
Identities = 65/66 (98%)
Strand = Plus / Minus
Query: 65 tataatgatttatcccgcgatattaccatatttatggtaatatcgcggggattataatat 124
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1990 tataatgatttaccccgcgatattaccatatttatggtaatatcgcggggattataatat 1931
Query: 125 atatat 130
||||||
Sbjct: 1930 atatat 1925
Score = 106 bits (51), Expect = 8e-23
Identities = 100/120 (83%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 172 tawtttattatacacaaaggtataaataatattaatawtgccmaagaataccgaaacaaa 231
|| ||||||||| | | ||||||| |||||||||||| |||| |||||||||||| ||
Sbjct: 1883 tattttattatatatataggtatatataatattaatagtgccaaagaataccgaat-aat 1825
Query: 232 atgataatagatataatagarrcnsmsccataataaagcatattatggcngggnaattaa 291
|||||||||||||||||| | | |||||||| ||||||||||||| ||| ||||||
Sbjct: 1824 atgataatagatataatatatacccagccataatatagcatattatggctgggtaattaa 1765
>3x_Contig1619
Length = 7770
Score = 99.8 bits (48), Expect = 6e-21
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 4 ccccccgcggctcacccaaccctacggttgggtgatgccgcggggggaagat 55
|||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2481 ccccccgcggctcacccaaccctagggttgggtgatgccgcggggggaagat 2532
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.720 1.36
Gapped
Lambda K H
1.43 0.720 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 23,998
Number of Sequences: 1807
Number of extensions: 23998
Number of successful extensions: 8044
Number of sequences better than 1.0e-20: 2
length of query: 685
length of database: 10,358,551
effective HSP length: 16
effective length of query: 669
effective length of database: 10,329,639
effective search space: 6910528491
effective search space used: 6910528491
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.0 bits)
S1: 11 (23.2 bits)
S2: 48 (99.8 bits)